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大规模调查破译的饮用水抗药性及宿主追踪目录

发布者:抗性基因网 时间:2020-03-26 浏览量:801

       摘要

       背景:
       抗生素耐药基因(ARGs)被认为是一种新兴的环境污染物,在各种环境中都有大量的发现。饮用水中精氨酸(ARGs)的发生对人体健康造成潜在的危害,越来越受到人们的重视。然而,饮用水中蕴藏的精氨酸在很大程度上仍未被开发。在本研究中,我们旨在建立广泛地区饮用水样本的抗药性目录,并探索ARGs的潜在宿主。
       结果:
       建立了饮用水中抗药性的分类目录,并利用亚基因组方法对ARGs进行了大规模的寄主追踪。在中国、香港、澳门、台湾、南非、新加坡和美国25个城市的饮用水点采集饮用水样品,艺龙网共检测到181个ARG亚型,共16个ARG型,每2.8个细胞的丰度范围分别为2.8~10~2个,4.2个×10-1个拷贝。中国北方(河南省)的丰度最高。在饮用水中,杆菌肽、多药、氨基糖苷、磺胺和β-内酰胺耐药基因占优势。在测试的饮用水样品中,84%的样品的ARG丰度高于典型的沉积物和土壤环境生态系统。基于亚基因组组装的宿主追踪分析确定了Acidovorax、不动杆菌、气单胞菌、甲基杆菌、甲基过筛菌、分枝杆菌、极谱单胞菌和假单胞菌为ARGs的宿主。此外,通过网络分析提出了ARGs在饮用水系统中的水平迁移潜力。
       结论:
       利用大规模调查编制的抗药性目录为今后饮用水中精氨酸的全球监测和风险管理研究提供了有益的参考。


BACKGROUND:

Excesses of antibiotic resistance genes (ARGs), which are regarded as emerging environmental pollutants, have been observed in various environments. The incidence of ARGs in drinking water causes potential risks to human health and receives more attention from the public. However, ARGs harbored in drinking water remain largely unexplored. In this study, we aimed at establishing an antibiotic resistome catalogue in drinking water samples from a wide range of regions and to explore the potential hosts of ARGs.

RESULTS:

A catalogue of antibiotic resistome in drinking water was established, and the host-tracking of ARGs was conducted through a large-scale survey using metagenomic approach. The drinking water samples were collected at the point of use in 25 cities in mainland China, Hong Kong, Macau, Taiwan, South Africa, Singapore and the USA. In total, 181 ARG subtypes belonging to 16 ARG types were detected with an abundance range of 2.8 × 10-2 to 4.2 × 10-1 copies of ARG per cell. The highest abundance was found in northern China (Henan Province). Bacitracin, multidrug, aminoglycoside, sulfonamide, and beta-lactam resistance genes were dominant in drinking water. Of the drinking water samples tested, 84% had a higher ARG abundance than typical environmental ecosystems of sediment and soil. Metagenomic assembly-based host-tracking analysis identified Acidovorax, Acinetobacter, Aeromonas, Methylobacterium, Methyloversatilis, Mycobacterium, Polaromonas, and Pseudomonas as the hosts of ARGs. Moreover, potential horizontal transfer of ARGs in drinking water systems was proposed by network and Procrustes analyses.

CONCLUSIONS:

The antibiotic resistome catalogue compiled using a large-scale survey provides a useful reference for future studies on the global surveillance and risk management of ARGs in drinking water.

       https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5704573/